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Table 5 Molecular function categories by Gene Ontology (GO) slim classification of the total identified proteins (725), the changed proteins (34) after 6 h of sleep deprivation (SD) and changed proteins common in all 8 subjects (16) after 6 h of SD

From: Human blood serum proteome changes after 6 hours of sleep deprivation at night

Molecular function categories of GO slim classification

Total identified proteins (725*)

Changed proteins after 6 h of sleep deprivation (34)

Changed proteins common in all 8 subjects (16)

Number of proteins

Percentage

Number of proteins in each molecular function category

Protein Short Name

Percentage

Number of proteins in each molecular function category

Protein Short Name

Percentage

Protein Binding

363

51,78%

18

↓ASCC3, ↓C163A, ↑CADH5, ↓CRHBP, ↑ELTD1, ↓FA7, ↓GSHR, ↑HEM2, ↓IC1, ↓LAMB1, ↓LIRB3, ↓LOXL3, ↓MASP1, ↓PTPRG, ↑S10A6, ↓SEM7A, ↓SODE, ↑TPM2

52,94%

9

↓C163A, ↑CADH5, ↓FA7, ↓IC1, ↓LAMB1, ↓LOXL3, ↓MASP1, ↓PTPRG, ↓SODE

56,25%

Ion Binding

275

39,23%

17

↓ASCC3, ↓C1R, ↑CADH5, ↑CADH6, ↑ELTD1, ↓FA7, ↓FBLN1, ↓GSHR, ↑HEM2 ↓LOXL3, ↓MASP1, ↑MYG, ↑POTEF, ↑POTEI, ↑S10A6, ↓SODE, ↑ZN605

50,00%

9

↓C1R, ↑CADH5, ↑CADH6, ↓FA7, ↓FBLN1, ↓LOXL3, ↓MASP1, ↑POTEF, ↓SODE

56,25%

Hydrolase Activity

139

19,83%

8

↓ASCC3, ↓BST1, ↓C1R, ↑EST1, ↓FA7, ↓MASP1, ↓PCYOX, ↓PTPRG

23,53%

6

↓BST1, ↓ C1R, ↓FA7, ↓MASP1, ↓PCYOX, ↓PTPRG

37,50%

Enzyme Regulator Activity

72

10,27%

2

↓FBLN1, ↓IC1

5,88%

2

↓FBLN1, ↓IC1

12,50%

Nucleotide Binding

72

10,27%

6

↓ASCC3, ↓BST1, ↓GSHR, ↑LDH6, ↑POTEF, ↑POTEI

17,65%

2

↓BST1, ↑POTEF

12,50%

Structural Molecule Activity

66

9,42%

3

↓FBLN1, ↓LAMB1, ↑TPM2

8,82%

2

↓FBLN1, ↓LAMB1

12,50%

Molecular transducer Activity

65

9,27%

3

↑ELTD1, ↓LIRB3, ↓PTPRG

8,82%

1

↓PTPRG

6,25%

Transferase Activity

56

7,99%

0

 

0%

0

 

0%

Lipid Binding

43

6,13%

1

↓LAMB1

2,94%

1

↓LAMB1

6,25%

Carbohydrate Binding

41

5,85%

1

↓ATRN

2,94%

1

↓ATRN

6,25%

Nucleic Acid Binding

39

5,56%

2

↓ASCC3, ↑ZN605

5,88%

0

 

0%

Transporter Activity

34

4,85%

3

↑MYG, ↓PCYOX, ↑S10A6

8,82%

1

↑PCYOX

6,25%

Antioxidant Activity

16

2,28%

2

↓GSHR, ↓SODE

5,88%

1

↓SODE

6,25%

Oxygen Binding

8

1,14%

1

↑MYG

2,94%

0

 

0%

Electron Carrier Activity

4

0,57%

1

↓GSHR

2,94%

0

 

0%

Molecular Adaptor Activity

2

0,29%

0

 

0%

0

 

0%

Chromatin binding

3

0,43%

0

 

0%

0

 

0%

Unclassified

104

14,84%

4

↑H4, ↓IGDC4, ↑IGHD, ↓SAA4

11,76%

0

 

0%

  1. Comparison of molecular function categories based on GO slim classifications of our 3 different groups of proteins (725, 34 and 16) in the system biological database WebGestalt. The underlined proteins were found in both groups of proteins (34 and 16) after 6 h of sleep deprivation. The ↑ and ↓ represent up- and down-regulated proteins, respectively. For full name of the protein, see Table 3. *Entrezgene identifier is recommended to use in WebGestalt, therefore we converted the 725 Swissprot IDs ending up with 701 Entrezgene IDs, used in this analysis. p < 0.05).